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Initiating an Integrated Data Management for PaCOOS
Initiating
an Integrated Data
=
Management
for PaCOOS
A
joint (NWC-SWC) west coast project
=
supported by
NOAA IOOS
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Initiating an Integrated Data Management for PaCOOS
Why
does IOOS need a data
=
integration
project?
•<=
/font> NM=
FS has
extensive and intensive west
coa=
st data
holdings
•<=
/font> Nee=
d to serve
various survey & other
bio=
logical data
sets
•<=
/font> App=
ropriate to
integrate biological and
phy=
sical
observations
•<=
/font> Int=
egrating west
coast data sets into
ba=
ckbone would
serve regional associations
and=
identify gaps
•<=
/font> De=
monstration of
integrating ecological &
phy=
sical data
sets to RAs
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Initiating an Integrated Data Management for PaCOOS
Requirements
for IOOS data
=
integration
•<=
/font> IOO=
S DMAC
compliance
•<=
/font> Con=
sistency with
national standards
•<=
/font> Cap=
abilities for
data discovery, access,
vis=
ualization
& transport
•<=
/font> Int=
egrate variety
of data sets
•<=
/font> Com=
mon vocabulary
between data sets
•<=
/font> Tr=
ansparency
& interoperability within larger
dat=
a system
•<=
/font> Gre=
ater presence
of biological data
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Initiating an Integrated Data Management for PaCOOS
•<=
/font> Lo=
ng-term
planning & design for PaCOOS DM
syst=
em
•<=
/font> Id=
entify steps
for fully interoperable data system
•<=
/font> Gui=
dance for
other regional OOS DM
•<=
/font> Tw=
o pilot
projects - combining physical &
bio=
logical data
sets
–<=
/font> Ben=
thic fish
habitat
–<=
/font> Pel=
agic
observation systems
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Initiating an Integrated Data Management for PaCOOS
•<=
/font> Coo=
rdination
meetings
•<=
/font> Les=
sons learned
•<=
/font> Met=
adata
standardization initiated
•<=
/font> Sup=
port funds for
improving data delivery
•<=
/font> =
Milestone-
Implement OPeNDAP server
for=
CalCOFI
physical & biological data
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Initiating an Integrated Data Management for PaCOOS
=
Physical &
Biological Information
from
Pelagic Observation Systems
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Initiating an Integrated Data Management for PaCOOS
•<=
/font> Jer=
ome’s
presentation material goes
here=
------=_NextPart_01C6384E.C2F4B760
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Initiating an Integrated Data Management for PaCOOS
•<=
/font> Com=
plete combined
LAS for all data sets
•<=
/font> Con=
tinue efforts
to agree upon &
imp=
lement
community standards
•<=
/font> Del=
iver document
to IOOS on developing
reg=
ional
integrated DM system
•<=
/font> Ide=
ntify/support
integration & delivery of
add=
itional west
coast data sets
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Initiating an Integrated Data Management for PaCOOS
Initiating an Integrated
Data Management for PaCOOS
A
joint (NWC-SWC) west coast project
supported
by NOAA IOOS
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Initiating an Integrated Data Management for PaCOOS
Why does IOOS need a data integration
project?
• NMFS has extensive and intensive west =
coast data holdings
•<=
/span> Need to serve=
various
survey & other biologi=
cal
data sets
•<=
/span> Appropriate to integrate biological and =
physical observations
•<=
/span> Integrating west coast data sets into backbone would serve regional associations =
=
and identify gaps
•<=
/span> Demonstration of integrating ecological & =
physical data sets to RAs
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Initiating an Integrated Data Management for PaCOOS
Requirements for IOOS data integration
•<=
/span> IOOS DMAC compliance
•<=
/span> Consistency with national standards
•<=
/span> Capabilities for data discovery, access, visualization & transport
•<=
/span> Integrate variety of data sets
•<=
/span> Common vocabulary between data sets
•<=
/span> Transparency & interoperability within larger =
data system
•<=
/span> Greater presence of biological data
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Content-Type: text/html; charset="us-ascii"
Initiating an Integrated Data Management for PaCOOS
Project Objectives
• Long-term
planning & design for PaCOOS DM system
• I=
dentify
steps for fully interoperable data system
• G=
uidance
for other regional OOS DM
• Two pilot
projects - combining physical & biological
data sets
– B=
enthic
fish habitat
– P=
elagic
observation systems
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Content-Transfer-Encoding: quoted-printable
Content-Type: text/html; charset="us-ascii"
Initiating an Integrated Data Management for PaCOOS
Project Accomplishments - FY 05
•
•
•
<=
span
class=3DBB style=3D'position:absolute;left:-3.85%'>• Support f=
unds for
improving data delivery
•
• Milest=
one-
Implement OPeNDAP server for CalCOFI physical & biologic=
al
data
Initiating an Integrated Data Management for PaCOOS
Physic=
al
& Biological Information from
Pelagic Observation Systems
• Portal page created=
3;
• Hierarchical data cata=
log
developed
• OPeNDAP to ArcGIS
converters developed
• Data sets served on LAS
and OPeNDAP
–<=
/span> CalCOFI - physical & biological
–<=
/span> US GLOBEC NEP -
physical & biological
–<=
/span> SWC midwater trawl survey
–<=
/span> SWC ecosystem cruise data
–<=
/span> SWC groundfish EFH data
Initiating an Integrated Data Management for PaCOOS
• Jerome’s presentation material goes here
Initiating an Integrated Data Management for PaCOOS
FY 06 Plans
<=
span
class=3DBB style=3D'position:absolute;left:-3.87%'>• Complete =
combined
LAS for all data sets
• Continue =
efforts
to agree upon & implement community standards
<=
/span>• Deliver d=
ocument
to IOOS on developing regional integrated DM system
<=
/span>• Identify/s=
upport
integration & delivery of additional west coast da=
ta
sets
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t.SetActive =3D _TBSetA
t.SetInactive=3D _TBSetI
t.SetPressed =3D _TBSetP
t.SetDisabled=3D _TBSetD
t.SetEnabled =3D _TBSetE
t.GetState =3D chkState
t.UserAction =3D action
t.ChgState =3D _TBUI
t.mObjId =3D oId
t.m_elementsId=3D oeId
t.mIsOn =3D 1
}
function _TBSetA()
{
var t=3Dthis
if( t.mIsOn && !t.GetState() )
t.ChgState( gHiliteClr,gShadowClr,0,0 )
}
function _TBSetI()
{
var t=3Dthis
if( t.mIsOn && !t.GetState() )
t.ChgState( gFaceClr,gFaceClr,0,0 )
}
function _TBSetP()
{
if( this.mIsOn )
this.ChgState( gShadowClr,gHiliteClr,1,1 )
}
function _TBSetD()
{ =20
this.ChgState( gFaceClr,gFaceClr,0,0 )
this.mIsOn =3D 0
}
function _TBSetE()
{
var t=3Dthis
if( !t.GetState() )
t.ChgState( gFaceClr,gFaceClr,0,0 )
else
t.ChgState( gShadowClr,gHiliteClr,1,1 )
t.mIsOn =3D 1
}
function _TBP()
{
var t=3Dthis
if( t.mIsOn ) {=20
if( t.UserAction !=3D null )
t.UserAction()
if( !t.GetState )
return
if( t.GetState() )
t.SetPressed()
else
t.SetActive()
} =20
}
function _TBUI( clr1,clr2,lOffset,tOffset )
{
SetBorder( GetObj( this.mObjId ),clr1,clr2 )
Offset( GetObj( this.m_elementsId ),lOffset,tOffset )
}
function Offset( obj, top, left ){ obj.style.top=3Dtop; obj.style.left=3Dle=
ft }
function SetBorder( obj, upperLeft, lowerRight )
{
s=3Dobj.style;
s.borderStyle =3D "solid"
s.borderWidth =3D 1=20
s.borderLeftColor =3D s.borderTopColor =3D upperLeft
s.borderBottomColor=3D s.borderRightColor =3D lowerRight
}
function GetBtnObj(){ return gBtnArr[window.event.srcElement.id] }
function BtnOnOver(){ b=3DGetBtnObj(); if( b !=3D null ) b.SetActive() }
function BtnOnDown(){ b=3DGetBtnObj(); if( b !=3D null ) b.SetPressed() }
function BtnOnOut(){ b=3DGetBtnObj(); if( b !=3D null ) b.SetInactive() }
function BtnOnUp()
{
b=3DGetBtnObj()
if( b !=3D null )
b.Perform()
else
Upd()
}
function GetNtsState(){ return parent.gNtsOpen }
function GetOtlState(){ return parent.gOtlOpen }
function GetOtlTxtState(){ return parent.gOtlTxtExp }
function NtsBtnSetFlag( fVal )
{
s=3Ddocument.all.item( this.m_flagId ).style
s.display=3D"none"
if( fVal )
s.display=3D""
else
s.display=3D"none"
}
function _BSetA_Border(){ b =3D gBtnArr[this.mObjId]; if( b !=3D null ) b.S=
etActive() }
function _BSetI_Border(){ b =3D gBtnArr[this.mObjId]; if( b !=3D null ) b.S=
etInactive() }
function _BSetP_Border(){ b =3D gBtnArr[this.mObjId]; if( b !=3D null ) b.S=
etPressed() }
function _BSetA_BorderImg()
{=20
b =3D gBtnArr[this.mBorderId]=20
if( b !=3D null && this.mIsOn && !b.GetState() ) {
obj=3Dthis.ChgState( gHiliteClr,gShadowClr,2 )
obj.style.posTop=3D0
}
}
function _BSetI_BorderImg()
{=20
b =3D gBtnArr[this.mBorderId]
if( b !=3D null && this.mIsOn && !b.GetState() ) {
obj=3Dthis.ChgState( gFaceClr,gFaceClr,1 )
obj.style.posTop=3D0
}
}
var gHiliteClr=3D"THREEDHIGHLIGHT",gShadowClr=3D"THREEDSHADOW",gFaceClr=3D"=
THREEDFACE"
var gBtnArr =3D new Array()
gBtnArr["nb_otl"] =3D new TxtBtn( "nb_otl","nb_otlElem",parent.ToggleOtlPan=
e,GetOtlState )
gBtnArr["nb_otlElem"] =3D new TxtBtn( "nb_otl","nb_otlElem",parent.ToggleOt=
lPane,GetOtlState )
gBtnArr["nb_nts"] =3D new ImgBtn( "nb_nts","nb_ntsBorder",10,parent.ToggleN=
tsPane )
gBtnArr["nb_nts"].SetActive =3D _BSetA_BorderImg;
gBtnArr["nb_nts"].SetInactive =3D _BSetI_BorderImg;
gBtnArr["nb_ntsBorder"] =3D new TxtBtn( "nb_ntsBorder","nb_ntsElem",parent.=
ToggleNtsPane,GetNtsState )
gBtnArr["nb_ntsElem"] =3D new TxtBtn( "nb_ntsBorder","nb_ntsElem",parent.To=
ggleNtsPane,GetNtsState )
gBtnArr["nb_prevBorder"] =3D gBtnArr["nb_prev"]=3D new ImgBtn( "nb_prev","n=
b_prevBorder",30,parent.GoToPrevSld )
gBtnArr["nb_nextBorder"] =3D gBtnArr["nb_next"]=3D new ImgBtn( "nb_next","n=
b_nextBorder",30,parent.GoToNextSld )
gBtnArr["nb_sldshw"]=3D new ImgBtn( "nb_sldshw","nb_sldshwBorder",18,parent=
.FullScreen )
gBtnArr["nb_sldshwBorder"] =3D new TxtBtn( "nb_sldshw","nb_sldshwBorder",pa=
rent.FullScreen,null )
gBtnArr["nb_sldshwBorder"].SetActive =3D _BSetA_Border;
gBtnArr["nb_sldshwBorder"].SetInactive =3D _BSetI_Border;
gBtnArr["nb_sldshwText"] =3D new TxtBtn( "nb_sldshw","nb_sldshwText",parent=
.FullScreen,null )
gBtnArr["nb_sldshwText"].SetActive =3D _BSetA_Border;
gBtnArr["nb_sldshwText"].SetInactive =3D _BSetI_Border;
gBtnArr["nb_voice"] =3D gBtnArr["nb_voiceBorder"] =3D new ImgBtn( "nb_voice=
","nb_voiceBorder",18,parent.ToggleVNarration )
gBtnArr["nb_otlTxtBorder"] =3D gBtnArr["nb_otlTxt"]=3D new ImgBtn( "nb_otlT=
xt","nb_otlTxtBorder",23,parent.ToggleOtlText )
gBtnArr["nb_ntsBorder"].m_flagId=3D "nb_nts"
gBtnArr["nb_ntsBorder"].SetFlag =3D NtsBtnSetFlag
gBtnArr["nb_otlTxt"].ChangeIcon=3D GetOtlTxtState
/*********************************************
Context menu implementation
_CM() is the function that's hooked up to
the oncontextmenu event. Once we're asked to
show the menu, we first build it by creating
DIVs on-the-fly. Then we position it=20
within the screen area so it doesn't get
clipped.
Creating the DIVs using createElement() means
we don't have to write out any extra HTML
into the slide HTML files.
**********************************************/
var sNext=3D"Next",sPrev=3D"Previous",sEnd=3D"End Show",sFont=3D"Arial",sAr=
row=3D"Arrow",sFreeform=3D"Freeform",sRect=3D"Rectangle",sOval=3D"Oval"
function ShowMenu()
{
BuildMenu();
var doc=3DPPTSld.document.body,x=3DPPTSld.event.clientX+doc.scrollLeft,y=
=3DPPTSld.event.clientY+doc.scrollTop
m =3D PPTSld.document.all.item("ctxtmenu")
m.style.pixelLeft=3Dx
if( (x+m.scrollWidth > doc.clientWidth)&&(x-m.scrollWidth > 0) )
m.style.pixelLeft=3Dx-m.scrollWidth
m.style.pixelTop=3Dy
if( (y+m.scrollHeight > doc.clientHeight)&&(y-m.scrollHeight > 0) )
m.style.pixelTop=3Dy-m.scrollHeight
m.style.display=3D""
}
function _CM()
{
if( !parent.IsFullScrMode() ) return;
if(!PPTSld.event.ctrlKey) {
ShowMenu()
return false
} else
HideMenu()
}
function BuildMenu()
{
if( PPTSld.document.all.item("ctxtmenu") ) return
var mObj=3DCreateItem( PPTSld.document.body )
mObj.id=3D"ctxtmenu"
mObj.style.visibility=3D"hidden"
var s=3DmObj.style
s.position=3D"absolute"
s.cursor=3D"default"
s.width=3D"120px"
SetCMBorder(mObj,"menu","black")
var iObj=3DCreateItem( mObj )
SetCMBorder( iObj, "threedhighlight","threedshadow" )
iObj.style.padding=3D2
CreateMenuItem( iObj,sNext,M_GoNextSld,M_True )
CreateMenuItem( iObj,sPrev,M_GoPrevSld,M_HasPrevSld )
=09
CreateSeparator( iObj )
CreateMenuItem( iObj,sEnd,M_End,M_True )
mObj.style.visibility=3D"visible"
}
function Cancel() { window.event.cancelBubble=3Dtrue; window.event.returnVa=
lue=3Dfalse }
function Highlight() { ChangeClr("activecaption","threedhighlight") }
function Deselect() { ChangeClr("threedface","menutext") }
function Perform()
{
e=3DPPTSld.event.srcElement
if( e.type=3D=3D"menuitem" && e.IsActive() )
e.Action()
else
PPTSld.event.cancelBubble=3Dtrue
}
function ChangeClr( bg,clr )
{
e=3DPPTSld.event.srcElement
if( e.type=3D=3D"menuitem" && e.IsActive() ) {
e.style.backgroundColor=3Dbg
e.style.color=3Dclr
}
}
function M_HasPrevSld() { return( parent.HasPrevSld() ) }
function M_GoNextSld() { if( gIsEndShow ) M_End(); else GoToNextSld() }
function M_GoPrevSld() { if( gIsEndShow ) { gIsEndShow=3D0; history.back();=
PPTSld.event.cancelBubble=3Dtrue; } else GoToPrevSld() }
function M_True() { return true }
function M_End() { window.close( self ) }
function CreateMenuItem( node,text,action,eval )
{
var e=3DCreateItem( node )
e.type=3D"menuitem"
e.Action=3Daction
e.IsActive=3Deval
e.innerHTML=3Dtext
if( !e.IsActive() )
e.style.color=3D"threedshadow"
e.onclick=3DPerform
e.onmouseover=3DHighlight
e.onmouseout=3DDeselect
s=3De.style;
s.fontFamily=3DsFont
s.fontSize=3D"9pt"
s.paddingLeft=3D2
}
function CreateSeparator( node )
{
var sObj=3DCreateItem( node )
SetCMBorder(sObj,"menu","menu")
var s=3DsObj.style
s.borderTopColor=3D"threedshadow"
s.borderBottomColor=3D"threedhighlight"
s.height=3D1
s.fontSize=3D"0px"
}
function CreateItem( node )
{
var elem=3DPPTSld.document.createElement("DIV")
node.insertBefore( elem )
return elem
}
function SetCMBorder( o,ltClr,rbClr )
{
var s=3Do.style
s.backgroundColor=3D"menu"
s.borderStyle=3D"solid"
s.borderWidth=3D1
s.borderColor=3DltClr+" "+rbClr+" "+rbClr+" "+ltClr
}
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Initiating an Integrated Data Management for PaCOOS
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No=
tes
1
A joint (NWC-SWC) west coast project
supported by NOAA IOOS
2
NMFS has extensive and intensive west coast data holdings
Need to serve various survey & other biological data sets
Appropriate to integrate biological and physical observations
Integrating west coast data sets into backbone would serve regional
associations and identify gaps
Demonstration of integrating ecological & physical data sets to =
RAs
3
IOOS DMAC compliance
Consistency with national standards
Capabilities for data discovery, access, visualization & transpo=
rt
Integrate variety of data sets
Common vocabulary between data sets
Transparency & interoperability within larger data system
Greater presence of biological data
4
Long-term planning & design for PaCOOS DM system
Identify steps for fully interoperable data system
Guidance for other regional OOS DM
Two pilot projects - combining physical & biological data sets
Benthic fish habitat
Pelagic observation systems
5
Coordination meetings
Lessons learned
Metadata standardization initiated
Support funds for improving data delivery
Milestone- Implement OPeNDAP server for CalCOFI physical &
biological data
6
Portal page created
Hierarchical data catalog developed
OPeNDAP to ArcGIS converters developed
Data sets served on LAS and OPeNDAP
CalCOFI - physical & biological
US GLOBEC NEP - physical & biological
SWC midwater trawl survey
SWC ecosystem cruise data
SWC groundfish EFH data
7
Jerome’s presentation material goes here
8
Complete combined LAS for all data sets
Continue efforts to agree upon & implement community standards
Deliver document to IOOS on developing regional integrated DM system=
Identify/support integration & delivery of additional west coast
data sets
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